Miyakogusa Predicted Gene

Lj1g3v0116700.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T8G9_LOTJA 214 75.3 75.3 (tr|I3T8G9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G16660.2 117 83.3 90.9 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:5465699-5467006 REVERSE LENGTH=166

Medicago Medtr5g007210.1 150 59.2 66.0 | transmembrane protein, putative | HC | chr5:1243259-1247003 | 20130731

Soybean Glyma01g44450.2 172 63.7 65.8

LJGI gnl|LJGI|GO036246 868 100.0 100.0 similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (89%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v0116700.1 length: 146 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 112-140

Seg seg seg NA 39-54
58-77

Wolf-PSORT

Lj1g3v0116700.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v0116700.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T8G9_LOTJA	214	75.3	75.3	(tr\|I3T8G9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G16660.2	117	83.3	90.9	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr5:5465699-5467006 REVERSE LENGTH=166
Medicago	Medtr5g007210.1	150	59.2	66.0	\| transmembrane protein, putative \| HC \| chr5:1243259-1247003 \| 20130731
Soybean	Glyma01g44450.2	172	63.7	65.8
LJGI	gnl\|LJGI\|GO036246	868	100.0	100.0	similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (89%)

no_ID
Lj1g3v0116700.1				length: 146 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	112-140
Seg	seg	seg	NA	39-54 58-77