Miyakogusa Predicted Gene

Lj1g3v0114230.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LFV4_SOYBN 725 81.6 89.0 (tr|I1LFV4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G14790.1 573 72.8 84.6 | Symbols: ATSUV3, EDA15 | ATP-dependent RNA helicase, mitochondrial (SUV3) | chr4:8496351-8499829 REVERSE LENGTH=571
Medicago Medtr5g006660.2 691 78.1 87.5 | ATP-dependent RNA helicase SUPV3L1 | HC | chr5:1030691-1022392 | 20130731
Soybean Glyma11g00970.1 709 75.7 82.5  
LJGI gnl|LJGI|TC77458 1120 99.8 99.8 similar to UniRef100_Q0WMU8 Cluster: RNA helicase like protein; n=1; Arabidopsis thaliana|Rep: RNA helicase like protein - Arabidopsis thaliana (Mouse-ear cress), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0114230.2 length: 451 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 1.1e-09 252-331
HMMSmart SM00490 helicase 6e-14 243-331
ProfileScan PS51194 HELICASE_CTER 10.016 200-380
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4e-24 56-333
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.8e-10 63-175
230-332
HMMPanther PTHR12131 ATP-DEPENDENT 2.8e-202 45-411
Seg seg seg NA 347-359
410-421
Putative transmembrane regions
  From To
TM segments
SOSUI		 416 438
Wolf-PSORT
Lj1g3v0114230.2	chlo 7, mito 3.5, cyto_mito 2.5, nucl 1, plas 1, golg 1, nucl_plas 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0114230.2