Miyakogusa Predicted Gene
- Lj1g3v0112800.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N3J8_SOYBN |
1245 |
83.9 |
89.9 |
(tr|K7N3J8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G04200.1 |
916 |
65.5 |
79.0 |
| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr1:1109676-1113875 FORWARD LENGTH=732 |
| Medicago |
Medtr1g102840.1 |
1244 |
85.6 |
90.3 |
| dyggve-melchior-clausen syndrome protein | HC | chr1:46479963-46472357 | 20130731 |
| Soybean |
Glyma10g38920.1 |
1241 |
83.7 |
89.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0112800.1 |
length: 722 aa. |
| IPR019142 |
Dymeclin |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09742 |
Dymeclin |
1.4e-161 |
16-673 |
| no_ID |
|
| HMMPanther |
PTHR12895 |
FAMILY |
0 |
2-706 |
| HMMPanther |
PTHR12895:SF1 |
SUBFAMILY |
0 |
2-706 |
| Seg |
seg |
seg |
NA |
419-426 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
360 |
382 |
| 412 |
434 |
| 451 |
473 |
- Wolf-PSORT
Lj1g3v0112800.1 plas 4, chlo 3, nucl_plas 3, E.R._plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0112800.1 |
|