Miyakogusa Predicted Gene

Lj1g3v0101540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q1WK56_LOTJA 592 80.5 80.5 (tr|Q1WK56) CYC3 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G67260.2 95.1 68.3 79.4 | Symbols: TCP1 | TCP family transcription factor | chr1:25168152-25169307 REVERSE LENGTH=351
Medicago Medtr1g103380.1 180 39.7 47.4 | TCP family transcription factor | HC | chr1:46797920-46794627 | 20130731
Soybean Glyma20g28670.1 221 44.8 52.1  
LJGI gnl|LJGI|NP7225961 2008 99.7 99.7 GB|DQ202477.1|ABB36473.1 CYC3;TCP box gene; LjCYC3
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0101540.1 length: 370 aa.
IPR005333 Transcription factor, TCP
method AccNumber shortName E-value location
HMMPfam PF03634 TCP 8.7e-43 111-256
IPR017887 Transcription factor TCP subgroup
ProfileScan PS51369 TCP 34.612 114-172
IPR017888 CYC/TB1, R domain
ProfileScan PS51370 R 10.457 233-250
no_ID  
Seg seg seg NA 13-29
97-111
175-194
236-246
292-298
Wolf-PSORT
Lj1g3v0101540.1	nucl 9.5, cyto_nucl 6.5, cyto 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0101540.1