Miyakogusa Predicted Gene

Lj1g3v0052330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6ZRN5_SOYBN 750 75.9 82.6 (tr|C6ZRN5) Cysteine-rich protein OS=Glycine max PE=2 SV=1
TAIR_pep AT4G05200.1 486 52.1 63.3 | Symbols: CRK25 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 | chr4:2679793-2682309 REVERSE LENGTH=675
Medicago Medtr1g105650.1 627 65.6 75.9 | cysteine-rich receptor-kinase-like protein | HC | chr1:47634426-47637645 | 20130731
Soybean Glyma01g45170.3 749 75.9 82.6  
LJGI gnl|LJGI|TC62844 983 100.0 100.0 weakly similar to UniRef100_A7QKK5 Cluster: Chromosome chr2 scaffold_113, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_113, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0052330.1 length: 504 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 1.2e-33 342-504
ProfileScan PS50011 PROTEIN_KINASE_DOM 30.775 339-504
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 6.2e-08 339-502
IPR002902 Gnk2-homologous domain
HMMPfam PF01657 Stress-antifung 2.4e-22 32-129
146-243
ProfileScan PS51473 GNK2 21.875 27-129
135-243
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 460-472
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 1.8e-56 311-504
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 1.3e-11 259-346
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 345-367
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 2e-10 339-501
no_ID  
Gene3D G3DSA:1.10.510.10 no description 8.1e-25 402-504
Gene3D G3DSA:3.30.200.20 no description 3.8e-25 347-401
HMMPanther PTHR24420 FAMILY 1.5e-185 180-504
HMMPanther PTHR24420:SF412SUBFAMILY NOT 1.5e-185 180-504
Seg seg seg NA 8-21
35-43
251-260
277-289
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 22
276 298
Wolf-PSORT
Lj1g3v0052330.1	extr 4, mito 2, plas 2, E.R. 2, golg 2, golg_plas 2, E.R._plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0052330.1