Miyakogusa Predicted Gene

Lj1g3v0052160.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7K0Y2_MEDTR 150 50.5 61.7 (tr|G7K0Y2) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g005230 PE=4 SV=1

TAIR_pep AT4G33800.1 66.6 38.4 50.9 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16210404-16211307 REVERSE LENGTH=170

Medicago Medtr5g005230.1 150 50.5 61.7 | hypothetical protein | HC | chr5:336081-337571 | 20130731

Soybean Glyma01g45310.1 136 62.0 69.0

LJGI gnl|LJGI|TC66537 83.8 97.8 97.8 similar to UniRef100_A7QL89 Cluster: Chromosome chr3 scaffold_117, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_117, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v0052160.1 length: 202 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 10-19
28-53
138-147

Wolf-PSORT

Lj1g3v0052160.1 nucl 12, chlo 1, extr 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v0052160.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7K0Y2_MEDTR	150	50.5	61.7	(tr\|G7K0Y2) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g005230 PE=4 SV=1
TAIR_pep	AT4G33800.1	66.6	38.4	50.9	\| Symbols: \| unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:16210404-16211307 REVERSE LENGTH=170
Medicago	Medtr5g005230.1	150	50.5	61.7	\| hypothetical protein \| HC \| chr5:336081-337571 \| 20130731
Soybean	Glyma01g45310.1	136	62.0	69.0
LJGI	gnl\|LJGI\|TC66537	83.8	97.8	97.8	similar to UniRef100_A7QL89 Cluster: Chromosome chr3 scaffold_117, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr3 scaffold_117, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)

no_ID
Lj1g3v0052160.1				length: 202 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	10-19 28-53 138-147