Miyakogusa Predicted Gene

Lj1g3v0052100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LMA3_SOYBN 415 85.8 92.4 (tr|K7LMA3) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G49980.1 383 76.2 86.4 | Symbols: | DNA/RNA polymerases superfamily protein | chr1:18508026-18512111 FORWARD LENGTH=671
Medicago Medtr5g005030.1 398 83.0 91.1 | DNA polymerase kappa protein | HC | chr5:314338-309878 | 20130731
Soybean Glyma11g00410.1 415 85.8 92.4  
LJGI gnl|LJGI|TC59487 1415 100.0 100.0 similar to UniRef100_Q9LPM1 Cluster: F2J10.13 protein; n=1; Arabidopsis thaliana|Rep: F2J10.13 protein - Arabidopsis thaliana (Mouse-ear cress), partial (54%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0052100.1 length: 250 aa.
IPR001126 DNA-repair protein, UmuC-like
method AccNumber shortName E-value location
Molecular Function GO:0003684 damaged DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006281 DNA repair    
HMMPfam PF00817 IMS 7.5e-37 125-250
IPR017963 DNA-repair protein, UmuC-like, N-terminal
Molecular Function GO:0003684 damaged DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006281 DNA repair    
ProfileScan PS50173 UMUC 38.649 122-250
no_ID  
Gene3D G3DSA:3.30.70.270 no description 6.5e-15 180-250
HMMPanther PTHR11076 DNA 8.1e-98 44-250
HMMPanther PTHR11076:SF12 DNA 8.1e-98 44-250
superfamily SSF56672 DNA/RNA 9.3e-53 94-250
Wolf-PSORT
Lj1g3v0052100.1	cyto 4, nucl 3, mito 3, cysk 3, cysk_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0052100.1