Miyakogusa Predicted Gene

Lj1g3v0001050.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K5N9_SOYBN 799 84.0 91.8 (tr|K7K5N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G76630.2 523 56.6 72.6 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:28759699-28765042 FORWARD LENGTH=1168
Medicago Medtr5g004660.2 811 85.7 92.2 | superkiller-like protein | HC | chr5:57838-73020 | 20130731
Soybean Glyma01g45670.1 731 80.8 90.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0001050.3 length: 476 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5e-16 131-158
220-436
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 9.395 2-35
227-260
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 3.1e-05 4-34
227-259
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.011 2-35
227-260
ProfileScan PS50005 TPR 9.853 2-35
227-260
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 2.6e-76 2-473
HMMPanther PTHR23083:SF160PUTATIVE UNCHARACTERIZED 2.6e-76 2-473
superfamily SSF48452 TPR-like 2.1e-08 2-293
160-357
319-452
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 18
448 470
Wolf-PSORT
Lj1g3v0001050.3	nucl 3, E.R._plas 3, plas 2.5, E.R. 2.5, cyto_nucl 2.5, cyto 2, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0001050.3