Miyakogusa Predicted Gene

Lj0g3v0363789.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep AT5G42320.1 49.7 70.0 83.3 | Symbols: | Zn-dependent exopeptidases superfamily protein | chr5:16918651-16920845 REVERSE LENGTH=379

Medicago Medtr3g115290.1 52.4 76.7 83.3 | zinc carboxypeptidase family protein | HC | chr3:53912181-53907394 | 20130731

Soybean Glyma06g02070.1 53.9 83.3 83.3

LJGI gnl|LJGI|TC81046 133 88.9 88.9 similar to UniRef100_A7QPB1 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)

Putative transmembrane regions

From To

TM segments
SOSUI 4 25

Wolf-PSORT

Lj0g3v0363789.1 chlo 5.5, cyto 5, chlo_mito 4.5, mito 2.5, cyto_nucl 2.5, cyto_E.R. 2.5, cyto_plas 2.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0363789.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	AT5G42320.1	49.7	70.0	83.3	\| Symbols: \| Zn-dependent exopeptidases superfamily protein \| chr5:16918651-16920845 REVERSE LENGTH=379
Medicago	Medtr3g115290.1	52.4	76.7	83.3	\| zinc carboxypeptidase family protein \| HC \| chr3:53912181-53907394 \| 20130731
Soybean	Glyma06g02070.1	53.9	83.3	83.3
LJGI	gnl\|LJGI\|TC81046	133	88.9	88.9	similar to UniRef100_A7QPB1 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)