Miyakogusa Predicted Gene

Lj0g3v0363619.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q0GLD1_SOYBN 330 62.7 67.7 (tr|Q0GLD1) Dof21 OS=Glycine max PE=2 SV=1
TAIR_pep AT4G24060.1 162 35.6 45.7 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr4:12503970-12505417 FORWARD LENGTH=342
Medicago Medtr3g091820.1 345 62.3 67.0 | Dof-type zinc finger DNA-binding family protein | HC | chr3:41895073-41896886 | 20130731
Soybean Glyma04g41170.1 330 62.7 67.7  
LJGI gnl|LJGI|BP051573 252 100.0 100.0 similar to UniRef100_A7QU31 Cluster: Chromosome chr2 scaffold_176, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_176, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0363619.1 length: 296 aa.
IPR003851 Zinc finger, Dof-type
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
BlastProDom PD007478 Q8RVK0_HORVU_Q8RVK0; 5e-30 37-99
HMMPfam PF02701 zf-Dof 4e-37 41-100
PatternScan PS01361 ZF_DOF_1 NA 47-83
ProfileScan PS50884 ZF_DOF_2 29.264 45-99
no_ID  
HMMPanther PTHR31992 FAMILY 1.5e-49 32-147
HMMPanther PTHR31992:SF0 SUBFAMILY 1.5e-49 32-147
Seg seg seg NA 100-118
165-170
240-254
Wolf-PSORT
Lj0g3v0363619.1	nucl 12, chlo 1, mito 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0363619.1