Miyakogusa Predicted Gene

Lj0g3v0363599.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LY40_SOYBN 538 76.8 81.5 (tr|K7LY40) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G21580.1 377 58.9 69.6 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:7557822-7565655 REVERSE LENGTH=2166
Medicago Medtr1g029710.1 535 66.7 72.9 | zinc finger CCCH domain protein, putative | HC | chr1:10267097-10277364 | 20130731
Soybean Glyma13g09610.1 540 76.8 81.5  
LJGI gnl|LJGI|TC66407 184 95.2 95.2  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0363599.3 length: 412 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00356 zinc 1.2 170-198
199-223
225-250
252-278
279-301
ProfileScan PS50103 ZF_C3H1 7.423 170-199
225-251
252-279
280-302
no_ID  
HMMPanther PTHR23102 ZINC 3e-90 77-347
HMMPanther PTHR23102:SF13 ZINC 3e-90 77-347
Seg seg seg NA 2-15
100-120
301-312
superfamily SSF90229 CCCH 0.018 250-278
165-205
279-303
Putative transmembrane regions
  From To
TM segments
SOSUI		 54 76
Wolf-PSORT
Lj0g3v0363599.3	nucl 6, mito 4.5, cyto_mito 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0363599.3