Miyakogusa Predicted Gene
- Lj0g3v0363549.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7K5X1_MEDTR |
142 |
43.0 |
60.8 |
(tr|G7K5X1) FAR1-related protein OS=Medicago truncatula GN=MTR_5g076070 PE=4 SV=1 |
| TAIR_pep |
AT4G38180.1 |
74.3 |
34.6 |
48.7 |
| Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788 |
| Medicago |
Medtr1g070355.1 |
159 |
41.9 |
60.8 |
| FAR1 DNA-binding domain protein | LC | chr1:31110429-31113072 | 20130731 |
| Soybean |
Glyma11g29330.1 |
122 |
40.5 |
59.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0363549.1 |
length: 189 aa. |
| IPR004330 |
FAR1 DNA binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03101 |
FAR1 |
1.4e-18 |
28-117 |
| no_ID |
|
| HMMPanther |
PTHR31669 |
FAMILY |
4.7e-14 |
19-189 |
| HMMPanther |
PTHR31669:SF0 |
SUBFAMILY |
4.7e-14 |
19-189 |
- Wolf-PSORT
Lj0g3v0363549.1 chlo 6, nucl 3, cyto 2, mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0363549.1 |
|