Miyakogusa Predicted Gene
- Lj0g3v0363059.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K9W1_SOYBN |
906 |
85.7 |
92.5 |
(tr|I1K9W1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G78280.1 |
740 |
70.2 |
81.9 |
| Symbols: | transferases, transferring glycosyl groups | chr1:29452823-29457118 FORWARD LENGTH=943 |
| Medicago |
Medtr3g099370.1 |
891 |
84.3 |
91.2 |
| transferring glycosyl group transferase | HC | chr3:45540890-45551717 | 20130731 |
| Soybean |
Glyma06g10660.1 |
906 |
85.7 |
92.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0363059.1 |
length: 512 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00256 |
A |
0.0026 |
22-62 |
| ProfileScan |
PS50181 |
FBOX |
10.160 |
16-62 |
| superfamily |
SSF81383 |
F-box |
4.8e-12 |
9-117 |
| IPR003347 |
JmjC domain |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00558 |
A |
2e-14 |
211-378 |
| ProfileScan |
PS51184 |
JMJC |
31.627 |
220-383 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1280.50 |
no description |
6.9e-09 |
17-63 |
| Gene3D |
G3DSA:2.60.120.650 |
no description |
1e-40 |
132-366 |
| HMMPanther |
PTHR12480 |
PHOSPHATIDYLSERINE |
1.9e-220 |
9-506 |
| HMMPanther |
PTHR12480:SF5 |
HISTONE |
1.9e-220 |
9-506 |
| HMMPfam |
PF12937 |
F-box-like |
8.8e-09 |
21-65 |
| HMMPfam |
PF13621 |
Cupin_8 |
8.8e-24 |
144-370 |
| superfamily |
SSF51197 |
Clavaminate |
1.1e-54 |
129-375 |
- Wolf-PSORT
Lj0g3v0363059.1 cyto 10, nucl 2, mito 1, plas 1, cysk_nucl 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0363059.1 |
|