Miyakogusa Predicted Gene

Lj0g3v0362279.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KUA7_MEDTR 803 68.7 77.9 (tr|G7KUA7) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g082160 PE=4 SV=1
TAIR_pep AT3G53700.1 125 23.9 44.3 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) superfamily protein | chr3:19900303-19902567 FORWARD LENGTH=754
Medicago Medtr7g082160.1 803 68.7 77.9 | PPR containing plant-like protein | HC | chr7:31475033-31473081 | 20130731
Soybean Glyma18g53290.1 466 66.2 75.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0362279.1 length: 576 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.35 172-195
246-270
345-368
HMMPfam PF13041 PPR_2 5.5e-11 411-454
HMMPfam PF13812 PPR_3 0.0055 377-407
HMMTigr TIGR00756 PPR: 5.6e-05 172-203
377-407
411-443
446-477
ProfileScan PS51375 PPR 6.708 167-197
203-237
238-272
338-372
302-337
373-407
408-442
443-477
502-536
no_ID  
HMMPanther PTHR24015 FAMILY 5.5e-78 24-562
HMMPanther PTHR24015:SF0 SUBFAMILY 5.5e-78 24-562
Seg seg seg NA 31-49
64-79
Wolf-PSORT
Lj0g3v0362279.1	chlo 7.5, chlo_mito 7.33333, mito 6, cyto_mito 3.83333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0362279.1