Miyakogusa Predicted Gene

Lj0g3v0362259.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N5B3_SOYBN 426 65.4 71.8 (tr|I1N5B3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G43370.1 327 67.8 80.0 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:18013431-18015376 FORWARD LENGTH=333
Medicago Medtr7g082150.1 407 77.5 87.3 | U1 small nuclear ribonucleoprotein | LC | chr7:31471924-31467830 | 20130731
Soybean Glyma18g53350.1 420 64.8 71.3  
LJGI gnl|LJGI|TC63577 1245 100.0 100.0 similar to UniRef100_A7QM44 Cluster: Chromosome chr5 scaffold_124, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_124, whole genome shotgun sequence - Vitis vinifera (Grape), partial (59%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0362259.1 length: 358 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 3.3e-16 65-134
HMMSmart SM00360 RNA 2e-19 64-137
ProfileScan PS50102 RRM 15.699 63-141
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2.8e-21 54-155
no_ID  
HMMPanther PTHR13952 U1 5.5e-85 13-352
Seg seg seg NA 150-163
242-262
265-290
324-354
superfamily SSF54928 RNA-binding 4.9e-25 51-173
Wolf-PSORT
Lj0g3v0362259.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0362259.1