Miyakogusa Predicted Gene

Lj0g3v0362209.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL B9GU34_POPTR 146 59.3 73.5 (tr|B9GU34) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_643614 PE=4 SV=1

TAIR_pep AT1G44414.1 138 61.8 70.0 | Symbols: | unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:16847781-16848086 FORWARD LENGTH=101

Medicago Medtr1g029990.1 165 76.4 82.7 | zinc-ribbon domain protein | HC | chr1:10433908-10434617 | 20130731

Soybean Glyma14g23850.1 136 59.6 71.1

LJGI gnl|LJGI|TC67199 654 99.7 99.7 similar to UniRef100_A7NVE1 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0362209.1 length: 110 aa.

no_ID

method AccNumber shortName E-value location

HMMPfam PF13248 zf-ribbon_3 1e-05 87-110

Seg seg seg NA 72-85

Wolf-PSORT

Lj0g3v0362209.1 chlo 11, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0362209.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	B9GU34_POPTR	146	59.3	73.5	(tr\|B9GU34) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_643614 PE=4 SV=1
TAIR_pep	AT1G44414.1	138	61.8	70.0	\| Symbols: \| unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:16847781-16848086 FORWARD LENGTH=101
Medicago	Medtr1g029990.1	165	76.4	82.7	\| zinc-ribbon domain protein \| HC \| chr1:10433908-10434617 \| 20130731
Soybean	Glyma14g23850.1	136	59.6	71.1
LJGI	gnl\|LJGI\|TC67199	654	99.7	99.7	similar to UniRef100_A7NVE1 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)

no_ID
Lj0g3v0362209.1				length: 110 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF13248	zf-ribbon_3	1e-05	87-110
Seg	seg	seg	NA	72-85