Miyakogusa Predicted Gene
- Lj0g3v0361519.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SP77_LOTJA |
429 |
98.1 |
98.1 |
(tr|I3SP77) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G19440.1 |
316 |
71.4 |
82.2 |
| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr5:6556493-6558123 FORWARD LENGTH=326 |
| Medicago |
Medtr8g062440.3 |
365 |
82.2 |
90.1 |
| cinnamyl alcohol dehydrogenase | HC | chr8:26099734-26103927 | 20130731 |
| Soybean |
Glyma12g02230.2 |
351 |
80.1 |
89.1 |
|
| LJGI |
gnl|LJGI|TC71064 |
1229 |
99.1 |
99.1 |
weakly similar to UniRef100_Q2Z1Z0 Cluster: Cinnamyl alcohol dehydrogenase; n=1; Prunus mume|Rep: Cinnamyl alcohol dehydrogenase - Prunus mume (Japanese flowering apricot), partial (96%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0361519.3 |
length: 245 aa. |
| IPR001509 |
NAD-dependent epimerase/dehydratase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0044237 |
cellular metabolic process |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| HMMPfam |
PF01370 |
Epimerase |
1.1e-22 |
9-199 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
4.3e-49 |
9-212 |
| no_ID |
|
| HMMPanther |
PTHR10366 |
NAD |
5e-106 |
2-215 |
| HMMPanther |
PTHR10366:SF9 |
CINNAMOYL-COA |
5e-106 |
2-215 |
| superfamily |
SSF51735 |
NAD(P)-binding |
3.5e-52 |
1-215 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
6 |
28 |
| 223 |
244 |
- Wolf-PSORT
Lj0g3v0361519.3 cyto 10, chlo 1, nucl 1, mito 1, chlo_mito 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0361519.3 |
|