Miyakogusa Predicted Gene

Lj0g3v0360389.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KIH0_SOYBN 974 78.9 85.2 (tr|I1KIH0) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G00730.1 710 58.1 70.2 | Symbols: ANL2, AHDP | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr4:299741-304103 REVERSE LENGTH=802
Medicago Medtr8g432540.1 971 77.8 85.7 | homeobox leucine zipper protein | HC | chr8:12328205-12321574 | 20130731
Soybean Glyma03g01860.1 969 77.8 83.6  
LJGI gnl|LJGI|TC71926 880 99.1 99.1 homologue to UniRef100_A7PXZ1 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0360389.2 length: 617 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 1.9e-18 123-178
HMMSmart SM00389 Homeodomain 4.7e-17 121-184
ProfileScan PS50071 HOMEOBOX_2 17.362 120-180
IPR002913 START domain
HMMPfam PF01852 START 1.8e-59 320-544
HMMSmart SM00234 in 1.7e-45 320-544
ProfileScan PS50848 START 42.319 311-547
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 8.6e-22 108-180
superfamily SSF46689 Homeodomain-like 4.3e-20 96-180
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 155-178
no_ID  
Coil coil coiled-coil NA 174-195
HMMPanther PTHR24325 FAMILY 4.2e-300 76-617
HMMPanther PTHR24325:SF0 SUBFAMILY 4.2e-300 76-617
Seg seg seg NA 13-19
90-99
268-279
superfamily SSF55961 Bet 3.7e-32 310-547
Wolf-PSORT
Lj0g3v0360389.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0360389.2