Miyakogusa Predicted Gene

Lj0g3v0359989.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L446_SOYBN 421 71.6 82.8 (tr|I1L446) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G22470.1 228 39.5 63.8 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:7966066-7967925 REVERSE LENGTH=619
Medicago Medtr6g069840.3 409 70.4 79.9 | pentatricopeptide (PPR) repeat protein | HC | chr6:25196306-25191240 | 20130731
Soybean Glyma09g30500.1 421 71.6 82.8  
LJGI gnl|LJGI|GO030841 71.9 89.1 89.1 weakly similar to UniRef100_A7R617 Cluster: Chromosome undetermined scaffold_1129, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1129, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0359989.1 length: 296 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 6.5e-11 28-60
63-93
HMMPfam PF13041 PPR_2 1.4e-17 103-151
172-221
242-291
HMMTigr TIGR00756 PPR: 1e-07 35-68
70-104
106-139
140-174
175-209
211-244
245-271
ProfileScan PS51375 PPR 6.533 33-67
1-32
68-102
103-137
138-172
173-207
208-242
243-277
278-296
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.9e-06 86-266
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-104 12-295
HMMPanther PTHR24015:SF0 SUBFAMILY 1.6e-104 12-295
superfamily SSF48452 TPR-like 8.1e-08 103-202
Wolf-PSORT
Lj0g3v0359989.1	chlo 4.5, nucl 4, chlo_mito 3.5, cyto 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0359989.1