Miyakogusa Predicted Gene

Lj0g3v0358459.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3S6E5_LOTJA 161 78.7 78.7 (tr|I3S6E5) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1

TAIR_pep AT5G22280.1 91.3 47.7 66.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:7374211-7375112 REVERSE LENGTH=108

Medicago Medtr2g086880.1 143 69.4 75.0 | NAC transcription factor-like protein | HC | chr2:36530061-36538039 | 20130731

Soybean Glyma12g31220.1 145 73.1 74.1

LJGI gnl|LJGI|TC66106 654 100.0 100.0 similar to UniRef100_A7QF57 Cluster: Chromosome undetermined scaffold_87, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_87, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)

Putative transmembrane regions

From To

TM segments
SOSUI 1 23

Wolf-PSORT

Lj0g3v0358459.1 vacu 6, extr 3, E.R. 2, chlo 1, nucl 1, golg 1, E.R._plas 1, cyto_E.R. 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0358459.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3S6E5_LOTJA	161	78.7	78.7	(tr\|I3S6E5) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep	AT5G22280.1	91.3	47.7	66.1	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr5:7374211-7375112 REVERSE LENGTH=108
Medicago	Medtr2g086880.1	143	69.4	75.0	\| NAC transcription factor-like protein \| HC \| chr2:36530061-36538039 \| 20130731
Soybean	Glyma12g31220.1	145	73.1	74.1
LJGI	gnl\|LJGI\|TC66106	654	100.0	100.0	similar to UniRef100_A7QF57 Cluster: Chromosome undetermined scaffold_87, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_87, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)