Miyakogusa Predicted Gene

Lj0g3v0358409.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I885_MEDTR 733 79.7 83.7 (tr|G7I885) Aspartyl-tRNA synthetase OS=Medicago truncatula GN=MTR_1g014140 PE=3 SV=1
TAIR_pep AT4G31180.2 599 63.4 76.4 | Symbols: | Class II aminoacyl-tRNA and biotin synthetases superfamily protein | chr4:15156696-15159362 FORWARD LENGTH=558
Medicago Medtr1g014140.1 733 79.7 83.7 | aspartate-tRNA ligase | HC | chr1:3102208-3107666 | 20130731
Soybean Glyma14g11710.3 733 79.5 83.9  
LJGI gnl|LJGI|TC62839 1764 99.9 99.9 similar to UniRef100_A7P536 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0358409.1 length: 415 aa.
IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
FPrintScan PR01042 TRNASYNTHASP 1.1e-22 160-172
177-190
330-346
370-384
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00152 tRNA-synt_2 2.1e-70 115-409
IPR004523 Aspartyl-tRNA synthetases
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004815 aspartate-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006422 aspartyl-tRNA aminoacylation    
HMMPanther PTHR22594:SF10 SUBFAMILY 1.1e-212 1-415
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 18.044 118-407
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.8e-17 1-98
superfamily SSF50249 Nucleic 2.9e-13 1-99
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPanther PTHR22594 ASPARTYL/LYSYL-TRNA 1.1e-212 1-415
no_ID  
Gene3D G3DSA:3.30.930.10 no description 1.1e-106 115-414
superfamily SSF55681 Class 6.1e-88 113-415
Wolf-PSORT
Lj0g3v0358409.1	cyto 6, chlo 5, nucl 1, pero 1, cysk 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0358409.1