Miyakogusa Predicted Gene

Lj0g3v0357009.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K1F7_SOYBN 926 79.8 86.0 (tr|I1K1F7) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G27960.1 653 59.8 72.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:10380513-10382593 REVERSE LENGTH=663
Medicago Medtr6g007110.1 875 77.8 83.4 | kinesin light chain | HC | chr6:1433465-1429354 | 20130731
Soybean Glyma19g01100.1 909 78.8 84.3  
LJGI gnl|LJGI|BP039459 841 99.5 99.5 similar to UniRef100_Q7XA91 Cluster: At3g27960; n=1; Arabidopsis thaliana|Rep: At3g27960 - Arabidopsis thaliana (Mouse-ear cress), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0357009.1 length: 587 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.2e-25 228-400
401-580
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 15.796 256-289
385-584
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF13181 TPR_8 0.0052 302-328
389-408
HMMSmart SM00028 Tetratricopeptide 28 256-289
299-332
341-374
385-418
425-458
467-500
510-543
551-584
ProfileScan PS50005 TPR 6.372 256-289
385-418
425-458
467-500
510-543
551-584
no_ID  
HMMPanther PTHR19959 KINESIN 3.8e-69 195-587
HMMPanther PTHR19959:SF23 SUBFAMILY 3.8e-69 195-587
HMMPfam PF13374 TPR_10 0.0019 257-284
HMMPfam PF13424 TPR_12 1.7e-14 422-498
Seg seg seg NA 526-538
superfamily SSF48452 TPR-like 6.4e-05 385-583
302-411
227-329
Wolf-PSORT
Lj0g3v0357009.1	nucl 7.5, cyto_nucl 6.5, cyto 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0357009.1