Miyakogusa Predicted Gene

Lj0g3v0354849.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K9E6_SOYBN 1226 82.4 87.5 (tr|K7K9E6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G06530.1 1072 71.6 81.7 | Symbols: | ABC-2 type transporter family protein | chr5:1990060-1994605 REVERSE LENGTH=751
Medicago Medtr1g054935.1 1219 81.7 86.5 | white-brown-complex ABC transporter family protein | HC | chr1:24118450-24130074 | 20130731
Soybean Glyma10g11000.1 1220 82.5 87.4  
LJGI gnl|LJGI|FS326586 1150 99.2 99.2 similar to UniRef100_A7Q050 Cluster: Chromosome chr8 scaffold_41, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_41, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0354849.1 length: 730 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 4.7e-18 184-311
ProfileScan PS50893 ABC_TRANSPORTER_2 22.249 137-383
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 4.8e-12 169-360
IPR013525 ABC-2 type transporter
Cellular Component GO:0016020 membrane    
HMMPfam PF01061 ABC2_membrane 3.2e-39 477-686
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 283-297
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.3e-50 159-369
no_ID  
Gene3D G3DSA:3.40.50.300 no description 9.9e-53 142-375
HMMPanther PTHR19241 ATP-BINDING 0 38-727
HMMPanther PTHR19241:SF23 ATP-BINDING 0 38-727
Seg seg seg NA 27-34
73-97
580-595
Putative transmembrane regions
  From To
TM segments
SOSUI		 494 515
529 551
580 602
610 632
645 667
703 723
Wolf-PSORT
Lj0g3v0354849.1	plas 6, E.R. 4, chlo 2, E.R._vacu 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0354849.1