Miyakogusa Predicted Gene

Lj0g3v0354659.4
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KW51_SOYBN 962 91.9 97.2 (tr|K7KW51) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G61140.1 896 84.8 95.1 | Symbols: | U5 small nuclear ribonucleoprotein helicase | chr5:24589999-24603311 FORWARD LENGTH=2146
Medicago Medtr3g025300.2 954 91.7 97.0 | U5 small nuclear ribonucleoprotein helicase | HC | chr3:7719529-7695186 | 20130731
Soybean Glyma15g40460.1 565 54.5 72.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0354659.4 length: 497 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 2e-06 266-344
HMMSmart SM00490 helicase 4.4e-13 254-345
ProfileScan PS51194 HELICASE_CTER 10.857 192-390
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 6e-20 15-141
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 0.0031 4-173
ProfileScan PS51192 HELICASE_ATP_BIND_1 16.639 1-157
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6e-37 6-364
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.3e-25 16-138
190-385
HMMPanther PTHR11752 HELICASE 0 6-497
HMMPanther PTHR11752:SF8 ACTIVATING 0 6-497
Putative transmembrane regions
  From To
TM segments
SOSUI		 285 307
Wolf-PSORT
Lj0g3v0354659.4	cyto 11, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0354659.4