Miyakogusa Predicted Gene

Lj0g3v0354459.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KTH8_SOYBN 330 66.7 77.8 (tr|I1KTH8) Uncharacterized protein (Fragment) OS=Glycine max PE=3 SV=2
TAIR_pep AT2G33160.1 241 51.1 70.5 | Symbols: | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | chr2:14053404-14056246 FORWARD LENGTH=664
Medicago Medtr8g030930.1 343 68.2 82.0 | polygalacturonase/glycoside hydrolase family protein | LC | chr8:11531499-11533056 | 20130731
Soybean Glyma08g15840.1 330 66.7 77.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0354459.1 length: 239 aa.
IPR000743 Glycoside hydrolase, family 28
method AccNumber shortName E-value location
Molecular Function GO:0004650 polygalacturonase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00295 Glyco_hydro_28 1.3e-77 2-235
PatternScan PS00502 POLYGALACTURONASE NA 86-99
IPR006626 Parallel beta-helix repeat
HMMSmart SM00710 Parallel 8.5e+03 29-55
56-77
79-99
109-130
175-220
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 2e-72 1-239
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 4.2e-75 2-237
no_ID  
HMMPanther PTHR31375 FAMILY 7.1e-109 1-237
HMMPanther PTHR31375:SF0 SUBFAMILY 7.1e-109 1-237
Wolf-PSORT
Lj0g3v0354459.1	nucl 8, chlo 2, cyto 2, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0354459.1