Miyakogusa Predicted Gene

Lj0g3v0354059.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IW90_MEDTR 1115 66.6 77.3 (tr|G7IW90) NB-LRR type disease resistance protein Rps1-k-2 OS=Medicago truncatula GN=MTR_3g020890 PE=4 SV=1
TAIR_pep AT3G14470.1 586 37.5 57.9 | Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054
Medicago Medtr3g020890.1 1115 66.6 77.3 | NB-ARC domain disease resistance protein | LC | chr3:6060991-6057172 | 20130731
Soybean Glyma03g04780.1 1016 61.6 74.1  
LJGI gnl|LJGI|GO040264 507 83.0 83.0 similar to UniRef100_Q2YE87 Cluster: NBS-LRR type disease resistance protein Rps1-k-2; n=1; Glycine max|Rep: NBS-LRR type disease resistance protein Rps1-k-2 - Glycine max (Soybean), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0354059.3 length: 847 aa.
IPR000767 Disease resistance protein
method AccNumber shortName E-value location
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 6e-19 182-197
257-271
355-369
784-800
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 1.7e-73 164-443
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.2e-33 142-391
no_ID  
Coil coil coiled-coil NA 40-61
Gene3D G3DSA:3.40.50.300 no description 2.5e-12 162-316
Gene3D G3DSA:3.80.10.10 no description 1.5e-20 740-829
HMMPanther PTHR23155 LEUCINE-RICH 7.4e-164 39-847
HMMPanther PTHR23155:SF138OS03G0848700 PROTEIN 7.4e-164 39-847
Seg seg seg NA 245-258
superfamily SSF52047 RNI-like 2e-34 524-831
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
Wolf-PSORT
Lj0g3v0354059.3	plas 6, cyto 2, E.R. 2, cyto_E.R. 2, chlo 1, nucl 1, mito 1, extr 1, chlo_mito 1, E.R._vacu 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0354059.3