Miyakogusa Predicted Gene

Lj0g3v0353949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SIY9_LOTJA 338 79.6 83.4 (tr|I3SIY9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G12560.2 101 28.1 45.5 | Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413
Medicago Medtr7g056820.1 210 38.3 52.0 | F-box protein interaction domain protein | LC | chr7:20477843-20475754 | 20130731
Soybean Glyma19g06670.1 228 40.9 53.9  
LJGI gnl|LJGI|DC598731 1088 98.8 98.8 similar to UniRef100_Q2HS69 Cluster: Cyclin-like F-box; F-box protein interaction domain; n=1; Medicago truncatula|Rep: Cyclin-like F-box; F-box protein interaction domain - Medicago truncatula (Barrel medic), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0353949.1 length: 384 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 5.3e-11 5-45
HMMSmart SM00256 A 9.1e-11 9-49
ProfileScan PS50181 FBOX 11.776 3-48
superfamily SSF81383 F-box 2.3e-14 6-52
IPR006527 F-box associated domain, type 1
HMMPfam PF07734 FBA_1 3e-07 239-357
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 3.2e-20 108-353
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 2.2e-11 5-45
HMMPanther PTHR32133 FAMILY 4e-13 4-56
HMMPanther PTHR32133:SF50 SUBFAMILY 4e-13 4-56
Wolf-PSORT
Lj0g3v0353949.1	nucl 5, cyto 4, chlo 1, plas 1, extr 1, cysk 1, E.R._vacu 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0353949.1