Miyakogusa Predicted Gene
- Lj0g3v0353459.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SL42_LOTJA |
171 |
57.4 |
66.3 |
(tr|I3SL42) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G47710.1 |
112 |
38.4 |
55.5 |
| Symbols: | Serine protease inhibitor (SERPIN) family protein | chr1:17558271-17560061 FORWARD LENGTH=391 |
| Medicago |
Medtr3g101010.1 |
129 |
44.8 |
60.1 |
| serpin-ZX-like protein | HC | chr3:46477918-46480654 | 20130731 |
| Soybean |
Glyma04g03860.1 |
145 |
50.0 |
62.8 |
|
| LJGI |
gnl|LJGI|TC63404 |
880 |
98.7 |
98.7 |
similar to UniRef100_Q2HSM8 Cluster: Proteinase inhibitor I4, serpin; n=1; Medicago truncatula|Rep: Proteinase inhibitor I4, serpin - Medicago truncatula (Barrel medic), partial (39%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0353459.1 |
length: 156 aa. |
| IPR000215 |
Serpin family |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004867 |
serine-type endopeptidase inhibitor activity |
|
|
| HMMPanther |
PTHR11461 |
SERINE |
5.5e-47 |
12-156 |
| IPR015554 |
Protease inhibitor I4, serpin, plant |
| HMMPanther |
PTHR11461:SF24 |
SERPIN-RELATED |
5.5e-47 |
12-156 |
| IPR023796 |
Serpin domain |
| HMMPfam |
PF00079 |
Serpin |
6.5e-33 |
11-156 |
| superfamily |
SSF56574 |
Serpins |
1.8e-34 |
12-156 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.497.10 |
no description |
2.4e-40 |
10-156 |
| Seg |
seg |
seg |
NA |
34-49 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
28 |
50 |
- Wolf-PSORT
Lj0g3v0353459.1 cyto 3, plas 3, E.R. 3, E.R._plas 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0353459.1 |
|