Miyakogusa Predicted Gene
- Lj0g3v0352849.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T8T5_LOTJA |
206 |
81.5 |
81.5 |
(tr|I3T8T5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G24800.1 |
101 |
68.3 |
83.3 |
| Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795 FORWARD LENGTH=410 |
| Medicago |
Medtr7g058430.1 |
103 |
73.3 |
85.0 |
| E3 ubiquitin-protein ligase PRT1-like protein | HC | chr7:21035981-21029441 | 20130731 |
| Soybean |
Glyma18g36930.1 |
119 |
50.8 |
58.9 |
|
| LJGI |
gnl|LJGI|GO040908 |
735 |
99.7 |
99.7 |
similar to UniRef100_A7QAB4 Cluster: Chromosome undetermined scaffold_70, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_70, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0352849.1 |
length: 124 aa. |
| IPR000433 |
Zinc finger, ZZ-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMPfam |
PF00569 |
ZZ |
8.7e-08 |
2-39 |
| ProfileScan |
PS50135 |
ZF_ZZ_2 |
10.137 |
1-54 |
| no_ID |
|
| HMMPanther |
PTHR15898 |
UNCHARACTERIZED |
3.9e-19 |
1-106 |
| HMMPanther |
PTHR15898:SF1 |
SUBFAMILY |
3.9e-19 |
1-106 |
| Seg |
seg |
seg |
NA |
78-100 |
- Wolf-PSORT
Lj0g3v0352849.1 chlo 9, extr 2, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0352849.1 |
|