Miyakogusa Predicted Gene

Lj0g3v0352669.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G8A389_MEDTR 865 79.4 86.1 (tr|G8A389) tRNA modification GTPase mnmE OS=Medicago truncatula GN=MTR_146s0004 PE=3 SV=1
TAIR_pep AT1G78010.1 677 66.3 78.1 | Symbols: | tRNA modification GTPase, putative | chr1:29333535-29336297 FORWARD LENGTH=560
Medicago Medtr3g073790.1 865 79.4 86.1 | tRNA modification GTPase trmE | HC | chr3:33306093-33311427 | 20130731
Soybean Glyma04g11560.1 863 81.1 86.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0352669.1 length: 546 aa.
IPR004520 tRNA modification GTPase MnmE
method AccNumber shortName E-value location
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006400 tRNA modification    
HAMAP MF_00379 GTPase_MnmE 29.732 84-546
HMMTigr TIGR00450 mnmE_trmE_thdF: 2.5e-115 98-546
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 1.9e-23 301-428
IPR006073 GTP binding domain
Molecular Function GO:0005525 GTP binding    
HMMPfam PF01926 MMR_HSR1 1.8e-20 302-423
IPR018948 GTP-binding protein TrmE, N-terminal
HMMPfam PF10396 TrmE_N 6.2e-38 85-205
IPR025867 tRNA modification GTPase MnmE C-terminal domain
HMMPfam PF12631 GTPase_Cys_C 1.1e-16 481-546
IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.30.1360.120 no description 2.2e-37 78-206
IPR027368 tRNA modification GTPase MnmE domain 2
Gene3D G3DSA:1.20.120.430 no description 7.1e-43 478-546
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.1e-45 157-467
no_ID  
Coil coil coiled-coil NA 270-291
Gene3D G3DSA:3.40.50.300 no description 2.4e-07 292-330
370-468
HMMPanther PTHR11649 MSS1/TRME-RELATED 4.5e-271 23-546
HMMPanther PTHR11649:SF32 GTP-BINDING 4.5e-271 23-546
Seg seg seg NA 214-231
Wolf-PSORT
Lj0g3v0352669.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0352669.1