Miyakogusa Predicted Gene

Lj0g3v0352229.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7MHL9_SOYBN 393 86.9 90.8 (tr|K7MHL9) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G71810.1 330 72.3 85.9 | Symbols: | Protein kinase superfamily protein | chr1:27002602-27007964 REVERSE LENGTH=692

Medicago Medtr6g038750.1 391 84.3 91.7 | unusual kinase, putative | HC | chr6:13909094-13897784 | 20130731

Soybean Glyma16g27500.1 393 86.9 90.8

LJGI --No_Hits--

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0352229.1 length: 268 aa.

IPR004147 UbiB domain

method AccNumber shortName E-value location

HMMPfam PF03109 ABC1 1.8e-23 179-266

no_ID

HMMPanther PTHR10566 CHAPERONE-ACTIVITY 1.2e-65 64-267

HMMPanther PTHR10566:SF10 ABC1 1.2e-65 64-267

Seg seg seg NA 1-12
25-38

Wolf-PSORT

Lj0g3v0352229.1 chlo 10, nucl 1, extr 1, vacu 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0352229.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7MHL9_SOYBN	393	86.9	90.8	(tr\|K7MHL9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G71810.1	330	72.3	85.9	\| Symbols: \| Protein kinase superfamily protein \| chr1:27002602-27007964 REVERSE LENGTH=692
Medicago	Medtr6g038750.1	391	84.3	91.7	\| unusual kinase, putative \| HC \| chr6:13909094-13897784 \| 20130731
Soybean	Glyma16g27500.1	393	86.9	90.8
LJGI	--No_Hits--

IPR004147	UbiB domain
Lj0g3v0352229.1				length: 268 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF03109	ABC1	1.8e-23	179-266
no_ID
HMMPanther	PTHR10566	CHAPERONE-ACTIVITY	1.2e-65	64-267
HMMPanther	PTHR10566:SF10	ABC1	1.2e-65	64-267
Seg	seg	seg	NA	1-12 25-38