Miyakogusa Predicted Gene

Lj0g3v0351759.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7KYF4_SOYBN 321 85.1 92.5 (tr|K7KYF4) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G02550.1 246 63.2 83.3 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits to 300 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:1120622-1121629 REVERSE LENGTH=307

Medicago Medtr8g041580.2 293 78.3 90.3 | Myb/SANT-like DNA-binding domain protein | HC | chr8:15675019-15672093 | 20130731

Soybean Glyma04g15520.1 276 76.2 85.5

LJGI gnl|LJGI|TC82229 801 99.8 99.8 similar to UniRef100_A7QLP4 Cluster: Chromosome chr13 scaffold_120, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_120, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0351759.1 length: 174 aa.

IPR024752 Myb/SANT-like domain

method AccNumber shortName E-value location

HMMPfam PF12776 Myb_DNA-bind_3 2.3e-18 22-116

Wolf-PSORT

Lj0g3v0351759.1 mito 6, chlo 5, nucl 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0351759.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7KYF4_SOYBN	321	85.1	92.5	(tr\|K7KYF4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G02550.1	246	63.2	83.3	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits to 300 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). \| chr4:1120622-1121629 REVERSE LENGTH=307
Medicago	Medtr8g041580.2	293	78.3	90.3	\| Myb/SANT-like DNA-binding domain protein \| HC \| chr8:15675019-15672093 \| 20130731
Soybean	Glyma04g15520.1	276	76.2	85.5
LJGI	gnl\|LJGI\|TC82229	801	99.8	99.8	similar to UniRef100_A7QLP4 Cluster: Chromosome chr13 scaffold_120, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr13 scaffold_120, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)

IPR024752	Myb/SANT-like domain
Lj0g3v0351759.1				length: 174 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF12776	Myb_DNA-bind_3	2.3e-18	22-116