Miyakogusa Predicted Gene

Lj0g3v0349789.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L482_SOYBN 410 77.5 88.0 (tr|I1L482) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G52450.1 347 66.1 79.1 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Medicago Medtr6g081410.1 391 76.2 86.1 | MATE efflux family protein | HC | chr6:30489199-30482425 | 20130731
Soybean Glyma09g31030.1 410 77.5 88.0  
LJGI gnl|LJGI|TC69358 396 85.9 85.9 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0349789.2 length: 255 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 1.4e-33 40-200
HMMTigr TIGR00797 matE: 1.8e-50 40-250
no_ID  
HMMPanther PTHR11206 MULTIDRUG 4.1e-121 16-255
HMMPanther PTHR11206:SF21 MATE 4.1e-121 16-255
Putative transmembrane regions
  From To
TM segments
SOSUI		 37 59
68 90
118 140
148 170
185 207
212 234
Wolf-PSORT
Lj0g3v0349789.2	plas 6, vacu 2, E.R. 2, golg 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0349789.2