Miyakogusa Predicted Gene

Lj0g3v0349789.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L482_SOYBN 484 82.0 89.6 (tr|I1L482) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G52450.1 421 72.0 87.4 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Medicago Medtr6g081410.1 452 78.0 87.6 | MATE efflux family protein | HC | chr6:30489199-30482425 | 20130731
Soybean Glyma09g31030.1 484 82.0 89.6  
LJGI gnl|LJGI|TC68231 357 88.7 88.7 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0349789.1 length: 291 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 1.5e-32 79-240
HMMTigr TIGR00797 matE: 6.2e-62 2-255
no_ID  
HMMPanther PTHR11206 MULTIDRUG 2.7e-154 1-290
HMMPanther PTHR11206:SF21 MATE 2.7e-154 1-290
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
30 52
74 96
110 132
152 174
220 242
253 274
Wolf-PSORT
Lj0g3v0349789.1	chlo 10, extr 2, mito 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0349789.1