Miyakogusa Predicted Gene
- Lj0g3v0349269.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I1N8T9_SOYBN |
380 |
94.2 |
98.4 |
(tr|I1N8T9) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
TAIR_pep |
AT3G57050.1 |
350 |
86.4 |
94.2 |
| Symbols: CBL | cystathionine beta-lyase | chr3:21111939-21114521 REVERSE LENGTH=464 |
Medicago |
Medtr1g064320.1 |
372 |
94.2 |
96.3 |
| cystathionine beta-lyase | HC | chr1:28308855-28299536 | 20130731 |
Soybean |
Glyma19g31280.1 |
380 |
94.2 |
98.4 |
|
LJGI |
gnl|LJGI|TC59348 |
1128 |
99.8 |
99.8 |
similar to UniRef100_A7QJK0 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0349269.2 |
length: 191 aa. |
IPR000277 |
Cys/Met metabolism, pyridoxal phosphate-dependent enzyme |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
HMMPanther |
PTHR11808 |
TRANS-SULFURATION |
2.2e-130 |
1-191 |
HMMPfam |
PF01053 |
Cys_Met_Meta_PP |
1.1e-72 |
1-189 |
PatternScan |
PS00868 |
CYS_MET_METAB_PP |
NA |
29-43 |
IPR006238 |
Cystathionine beta-lyase, eukaryotic |
Molecular Function |
GO:0004121 |
cystathionine beta-lyase activity |
|
|
Biological Process |
GO:0071266 |
'de novo' L-methionine biosynthetic process |
|
|
HMMPanther |
PTHR11808:SF18 |
CYSTATHIONINE |
2.2e-130 |
1-191 |
IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
Molecular Function |
GO:0003824 |
catalytic activity |
|
|
Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
Gene3D |
G3DSA:3.40.640.10 |
no description |
2.1e-30 |
2-86 |
IPR015422 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 2 |
Molecular Function |
GO:0003824 |
catalytic activity |
|
|
Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
Gene3D |
G3DSA:3.90.1150.10 |
no description |
2e-32 |
88-189 |
IPR015424 |
Pyridoxal phosphate-dependent transferase |
superfamily |
SSF53383 |
PLP-dependent |
2.1e-56 |
1-191 |
- Wolf-PSORT
Lj0g3v0349269.2 cyto 6, chlo 2, extr 2, vacu 1.5, E.R._vacu 1.5, nucl 1, pero 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0349269.2 |
|