Miyakogusa Predicted Gene

Lj0g3v0348799.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVX1_SOYBN 250 62.2 72.9 (tr|I1LVX1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G28050.1 207 53.2 62.9 | Symbols: TET7 | tetraspanin7 | chr4:13942566-13943621 REVERSE LENGTH=263
Medicago Medtr4g129670.1 249 62.8 72.3 | tetraspanin family protein | HC | chr4:54041164-54038606 | 20130731
Soybean Glyma04g19880.1 260 65.8 73.3  
LJGI gnl|LJGI|TC76721 1130 100.0 100.0 similar to UniRef100_A7PFH9 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0348799.1 length: 188 aa.
IPR018499 Tetraspanin/Peripherin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF00335 Tetraspannin 1e-16 1-180
no_ID  
HMMPanther PTHR32191 FAMILY 1.8e-103 1-186
HMMPanther PTHR32191:SF5 SUBFAMILY 1.8e-103 1-186
Seg seg seg NA 5-19
156-170
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
156 177
Wolf-PSORT
Lj0g3v0348799.1	vacu 4, plas 3, extr 3, golg 3, golg_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0348799.1 Not targeted -29.862 -0.036 -10.740 30.22% -19.086