Miyakogusa Predicted Gene
- Lj0g3v0348579.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KJ76_SOYBN |
146 |
79.3 |
87.0 |
(tr|K7KJ76) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G27460.1 |
109 |
61.5 |
76.9 |
| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:9693262-9694815 REVERSE LENGTH=491 |
| Medicago |
Medtr3g099753.1 |
147 |
79.3 |
88.0 |
| PPR containing plant-like protein | HC | chr3:45738160-45740398 | 20130731 |
| Soybean |
Glyma04g10540.1 |
146 |
79.3 |
87.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0348579.1 |
length: 96 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR24015 |
FAMILY |
1e-38 |
6-96 |
| HMMPanther |
PTHR24015:SF127SUBFAMILY |
NOT |
1e-38 |
6-96 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
31 |
50 |
| 69 |
91 |
- Wolf-PSORT
Lj0g3v0348579.1 chlo 4, cyto 4, nucl 2.5, chlo_mito 2.5, cysk_nucl 2.5, cyto_plas 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0348579.1 |
|