Miyakogusa Predicted Gene
- Lj0g3v0347529.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S7S2_LOTJA |
125 |
40.5 |
58.3 |
(tr|I3S7S2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G05642.1 |
58.5 |
35.3 |
57.6 |
| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr2:2098253-2100867 REVERSE LENGTH=532 |
| Medicago |
Medtr8g096680.1 |
127 |
38.8 |
61.8 |
| animal RPA1 domain protein | HC | chr8:40558216-40559002 | 20130731 |
| Soybean |
Glyma18g33200.1 |
74.7 |
33.3 |
60.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0347529.3 |
length: 165 aa. |
| IPR003871 |
Domain of unknown function DUF223 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02721 |
DUF223 |
6.6e-13 |
46-132 |
| IPR012340 |
Nucleic acid-binding, OB-fold |
| Gene3D |
G3DSA:2.40.50.140 |
no description |
4.6e-09 |
5-102 |
| superfamily |
SSF50249 |
Nucleic |
3.6e-08 |
2-112 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
121-134 |
- Wolf-PSORT
Lj0g3v0347529.3 cyto 9, nucl 2, chlo 1, extr 1, E.R. 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0347529.3 |
|