Miyakogusa Predicted Gene

Lj0g3v0347429.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SDU9_LOTJA 446 94.8 94.8 (tr|I3SDU9) Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G58710.1 287 75.3 88.8 | Symbols: ROC7 | rotamase CYP 7 | chr5:23717840-23719495 FORWARD LENGTH=204
Medicago Medtr3g070500.1 362 77.7 83.3 | peptidyl-prolyl cis-trans isomerase | HC | chr3:31635225-31631615 | 20130731
Soybean Glyma11g35280.1 345 74.8 78.2  
LJGI gnl|LJGI|TC62949 1374 100.0 100.0 similar to UniRef100_A5C2G6 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl cis-trans isomerase - Vitis vinifera (Grape), partial (84%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0347429.1 length: 230 aa.
IPR002130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain
method AccNumber shortName E-value location
Molecular Function GO:0003755 peptidyl-prolyl cis-trans isomerase activity    
Biological Process GO:0006457 protein folding    
FPrintScan PR00153 CSAPPISMRASE 5.5e-38 81-96
117-129
160-175
175-187
188-203
HMMPfam PF00160 Pro_isomerase 7.2e-45 65-225
ProfileScan PS50072 CSA_PPIASE_2 44.571 64-227
superfamily SSF50891 Cyclophilin-like 7.5e-72 58-228
IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
Molecular Function GO:0003755 peptidyl-prolyl cis-trans isomerase activity    
Biological Process GO:0006457 protein folding    
PatternScan PS00170 CSA_PPIASE_1 NA 112-129
no_ID  
Gene3D G3DSA:2.40.100.10 no description 8e-76 58-227
HMMPanther PTHR11071 PEPTIDYL-PROLYL 4.1e-114 58-228
Seg seg seg NA 128-139
Putative transmembrane regions
  From To
TM segments
SOSUI		 10 32
Wolf-PSORT
Lj0g3v0347429.1	chlo 5, nucl 2, cyto 2, vacu 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0347429.1