Miyakogusa Predicted Gene

Lj0g3v0346729.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T5L3_MEDTR 363 71.4 80.2 (tr|I3T5L3) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT2G20230.1 239 47.6 63.6 | Symbols: | Tetraspanin family protein | chr2:8725762-8727388 FORWARD LENGTH=270
Medicago Medtr1g069185.1 365 71.8 80.2 | tetraspanin family protein | HC | chr1:29778816-29783451 | 20130731
Soybean Glyma10g04820.1 320 66.3 76.4  
LJGI gnl|LJGI|TC67653 1481 100.0 100.0 weakly similar to UniRef100_A7Q1F8 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (77%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0346729.1 length: 247 aa.
IPR018499 Tetraspanin/Peripherin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF00335 Tetraspannin 1.1e-14 11-128
no_ID  
HMMPanther PTHR19282 TETRASPANIN 1.7e-22 1-200
HMMPanther PTHR19282:SF69 SUBFAMILY 1.7e-22 1-200
Seg seg seg NA 161-176
Putative transmembrane regions
  From To
TM segments
SOSUI		 10 32
69 91
102 124
157 179
Wolf-PSORT
Lj0g3v0346729.1	plas 6, golg 4, E.R._plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0346729.1