Miyakogusa Predicted Gene
- Lj0g3v0346119.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S445_LOTJA |
387 |
100.0 |
100.0 |
(tr|I3S445) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G74560.1 |
162 |
45.5 |
60.1 |
| Symbols: NRP1 | NAP1-related protein 1 | chr1:28017815-28019900 REVERSE LENGTH=256 |
| Medicago |
Medtr4g108570.1 |
178 |
49.0 |
62.5 |
| nucleosome/chromatin assembly factor group protein | HC | chr4:44984273-44980061 | 20130731 |
| Soybean |
Glyma17g10770.1 |
192 |
52.3 |
65.1 |
|
| LJGI |
gnl|LJGI|TC57374 |
1124 |
100.0 |
100.0 |
weakly similar to UniRef100_Q9M9V0 Cluster: F6A14.10 protein; n=1; Arabidopsis thaliana|Rep: F6A14.10 protein - Arabidopsis thaliana (Mouse-ear cress), partial (29%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0346119.1 |
length: 187 aa. |
| IPR002164 |
Nucleosome assembly protein (NAP) |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Biological Process |
GO:0006334 |
nucleosome assembly |
|
|
| HMMPanther |
PTHR11875 |
TESTIS-SPECIFIC |
3.2e-40 |
1-186 |
| HMMPfam |
PF00956 |
NAP |
1e-24 |
22-176 |
| no_ID |
|
| HMMPanther |
PTHR11875:SF20 |
SUBFAMILY |
3.2e-40 |
1-186 |
| superfamily |
SSF143113 |
NAP-like |
9.8e-38 |
23-183 |
- Wolf-PSORT
Lj0g3v0346119.1 nucl 6, cyto 4.5, cyto_E.R. 3, extr 1, pero 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0346119.1 |
|