Miyakogusa Predicted Gene
- Lj0g3v0345939.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9H2Q0_POPTR |
553 |
87.9 |
96.6 |
(tr|B9H2Q0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555746 PE=4 SV=1 |
| TAIR_pep |
AT5G46070.1 |
503 |
80.7 |
90.0 |
| Symbols: | Guanylate-binding family protein | chr5:18683468-18688397 FORWARD LENGTH=1082 |
| Medicago |
Medtr4g088220.1 |
543 |
88.3 |
93.4 |
| guanylate-binding family protein | HC | chr4:34807836-34816151 | 20130731 |
| Soybean |
Glyma13g24260.1 |
552 |
90.0 |
94.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0345939.1 |
length: 290 aa. |
| IPR003191 |
Guanylate-binding protein, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003924 |
GTPase activity |
|
|
| Molecular Function |
GO:0005525 |
GTP binding |
|
|
| HMMPfam |
PF02841 |
GBP_C |
8.3e-32 |
155-288 |
| superfamily |
SSF48340 |
Interferon-induced |
1.1e-29 |
155-290 |
| IPR015894 |
Guanylate-binding protein, N-terminal |
| Molecular Function |
GO:0003924 |
GTPase activity |
|
|
| Molecular Function |
GO:0005525 |
GTP binding |
|
|
| HMMPfam |
PF02263 |
GBP |
3.1e-33 |
2-150 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
1.8e-21 |
1-153 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1000.10 |
no description |
6.2e-24 |
157-286 |
| Gene3D |
G3DSA:3.40.50.300 |
no description |
9.5e-39 |
1-154 |
| HMMPanther |
PTHR10751 |
GUANYLATE |
1.9e-87 |
1-268 |
- Wolf-PSORT
Lj0g3v0345939.1 chlo 3, nucl_plas 3, nucl 2.5, plas 2.5, cyto 2, cysk 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0345939.1 |
|