Miyakogusa Predicted Gene

Lj0g3v0345919.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SNP2_LOTJA 343 90.9 90.9 (tr|I3SNP2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G54980.1 153 51.2 66.2 | Symbols: | Uncharacterised protein family (UPF0497) | chr5:22315799-22316560 FORWARD LENGTH=194
Medicago Medtr0160s0040.1 269 67.6 82.2 | CASP POPTRDRAFT-like protein | HC | scaffold0160:28011-30206 | 20130731
Soybean Glyma01g16360.1 253 69.7 76.8  
LJGI gnl|LJGI|TC73067 1104 99.8 99.8 weakly similar to UniRef100_A7P0P3 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0345919.1 length: 186 aa.
IPR006459 Uncharacterised protein family UPF0497, trans-membrane plant subgroup
method AccNumber shortName E-value location
HMMTigr TIGR01569 A_tha_TIGR01569: 1.3e-21 24-166
IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
HMMPfam PF04535 DUF588 1.8e-29 18-155
no_ID  
HMMPanther PTHR11615 NITRATE, 4e-50 6-166
HMMPanther PTHR11615:SF85 OS08G0536200 4e-50 6-166
Seg seg seg NA 67-82
Putative transmembrane regions
  From To
TM segments
SOSUI		 19 40
60 82
89 111
143 165
Wolf-PSORT
Lj0g3v0345919.1	chlo 5, plas 4, E.R. 3, nucl 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0345919.1