Miyakogusa Predicted Gene
- Lj0g3v0345729.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KW93_SOYBN |
330 |
61.9 |
70.4 |
(tr|K7KW93) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G08110.1 |
89.0 |
26.2 |
40.3 |
| Symbols: | nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases | chr5:2594854-2600114 REVERSE LENGTH=1141 |
| Medicago |
Medtr2g461560.1 |
338 |
61.7 |
72.0 |
| DEAD-box ATP-dependent RNA helicase, putative | HC | chr2:25426629-25443935 | 20130731 |
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0345729.1 |
length: 300 aa. |
| IPR019955 |
Ubiquitin supergroup |
| method |
AccNumber |
shortName |
E-value |
location |
| ProfileScan |
PS50053 |
UBIQUITIN_2 |
10.528 |
7-78 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.20.90 |
no description |
1.5e-08 |
8-89 |
| Seg |
seg |
seg |
NA |
155-164 |
| superfamily |
SSF54236 |
Ubiquitin-like |
1e-07 |
4-78 |
- Wolf-PSORT
Lj0g3v0345729.1 nucl 7, cyto 3, chlo 2, extr 1, cysk 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0345729.1 |
|