Miyakogusa Predicted Gene

Lj0g3v0345269.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K8M4_SOYBN 2103 79.8 85.6 (tr|K7K8M4) Condensin complex subunit 1 OS=Glycine max PE=3 SV=1
TAIR_pep AT3G57060.2 1766 68.5 80.3 | Symbols: | binding | chr3:21115078-21121051 REVERSE LENGTH=1415
Medicago Medtr1g051230.1 2125 79.7 85.5 | condensin complex subunit 1 | HC | chr1:20027112-20017618 | 20130731
Soybean Glyma02g18230.1 2093 79.6 85.4  
LJGI gnl|LJGI|TC62300 739 100.0 100.0 homologue to UniRef100_A9TU97 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0345269.1 length: 1330 aa.
IPR007673 Condensin subunit 1
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0007067 mitosis    
Biological Process GO:0030261 chromosome condensation    
HMMPIR PIRSF017127 Chromosome 0 1-1288
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1e-23 1173-1201
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 4.4e-45 109-1207
IPR024324 Condensin complex, subunit 1, N-terminal
HMMPfam PF12922 Cnd1_N 4.3e-38 78-244
IPR026003 HEAT repeat associated with sister chromatid cohesion protein
HMMPfam PF12765 Cohesin_HEAT 0.068 420-438
IPR026971 Condensin subunit 1/Condensin-2 complex subunit D3
Biological Process GO:0007076 mitotic chromosome condensation    
HMMPanther PTHR14222 CONDENSIN 8.8e-285 2-1213
no_ID  
Coil coil coiled-coil NA 453-474
846-867
1188-1209
HMMPanther PTHR14222:SF0 SUBFAMILY 8.8e-285 2-1213
HMMPfam PF12717 Cnd1 1.2e-59 976-1139
Seg seg seg NA 67-94
142-158
464-471
802-813
Wolf-PSORT
Lj0g3v0345269.1	chlo 7, nucl 4, cyto 1, vacu 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0345269.1