Miyakogusa Predicted Gene

Lj0g3v0344429.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP14_LOTJA 122 70.5 72.6 (tr|C0JP14) Putative basic helix-loop-helix protein BHLH9 OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT4G36930.1 95.5 88.9 92.6 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17414167-17415945 FORWARD LENGTH=373
Medicago Medtr5g017040.1 99.8 63.8 68.1 | helix loop helix DNA-binding domain protein | HC | chr5:6175718-6178846 | 20130731
Soybean Glyma01g39450.1 97.4 63.2 67.4  
LJGI gnl|LJGI|TC77685 406 96.3 96.3 similar to UniRef100_Q5ULY0 Cluster: Basic helix-loop-helix protein; n=1; Fragaria x ananassa|Rep: Basic helix-loop-helix protein - Fragaria ananassa (Strawberry), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0344429.2 length: 102 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 1.1e-14 32-84
HMMPfam PF00010 HLH 5.5e-10 38-78
HMMSmart SM00353 helix 2.3e-12 34-83
ProfileScan PS50888 BHLH 14.684 28-77
superfamily SSF47459 HLH, 1.7e-13 24-98
IPR024097 Basic helix-loop-helix leucine zipper transcription factor
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPanther PTHR10014 BASIC 3.3e-33 10-82
IPR024102 Basic helix-loop-helix leucine zipper transcription factor, plant
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPanther PTHR10014:SF30 BASIC 3.3e-33 10-82
no_ID  
Seg seg seg NA 12-28
Wolf-PSORT
Lj0g3v0344429.2	nucl 8.5, cyto_nucl 5, chlo 2, mito 1, plas 1, vacu 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0344429.2