Miyakogusa Predicted Gene
- Lj0g3v0344299.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S517_LOTJA |
443 |
92.7 |
92.7 |
(tr|I3S517) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G18940.1 |
337 |
70.8 |
79.0 |
| Symbols: | Mo25 family protein | chr5:6325972-6328097 FORWARD LENGTH=345 |
| Medicago |
Medtr2g021040.1 |
390 |
81.5 |
86.2 |
| structural constituent of ribosome protein, putative | HC | chr2:7107798-7113369 | 20130731 |
| Soybean |
Glyma13g28260.1 |
398 |
83.3 |
87.6 |
|
| LJGI |
gnl|LJGI|TC59314 |
1384 |
100.0 |
100.0 |
similar to UniRef100_A7NWD2 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0344299.1 |
length: 233 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
2.9e-78 |
2-232 |
| IPR013878 |
Mo25-like |
| HMMPanther |
PTHR10182 |
CALCIUM-BINDING |
1e-103 |
1-233 |
| HMMPfam |
PF08569 |
Mo25 |
2.7e-72 |
1-232 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
9.7e-78 |
12-233 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
29-57 |
| Seg |
seg |
seg |
NA |
33-48 |
- Wolf-PSORT
Lj0g3v0344299.1 mito 5.5, chlo 4, cyto_mito 3.5, nucl 2, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0344299.1 |
|