Miyakogusa Predicted Gene
- Lj0g3v0344279.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KBU8_MEDTR |
780 |
90.0 |
94.5 |
(tr|G7KBU8) Proline transporter OS=Medicago truncatula GN=MTR_5g081630 PE=4 SV=1 |
| TAIR_pep |
AT2G39890.2 |
654 |
77.2 |
89.0 |
| Symbols: PROT1, ATPROT1 | proline transporter 1 | chr2:16656022-16658202 FORWARD LENGTH=442 |
| Medicago |
Medtr5g081630.1 |
682 |
93.2 |
97.2 |
| transmembrane amino acid transporter family protein | HC | chr5:34974524-34979441 | 20130731 |
| Soybean |
Glyma14g06850.1 |
743 |
92.3 |
95.9 |
|
| LJGI |
gnl|LJGI|BP047422 |
672 |
99.2 |
99.2 |
similar to UniRef100_A7PID7 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0344279.2 |
length: 435 aa. |
| IPR013057 |
Amino acid transporter, transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01490 |
Aa_trans |
1e-74 |
56-431 |
| no_ID |
|
| HMMPanther |
PTHR22950 |
AMINO |
1e-68 |
4-435 |
| Seg |
seg |
seg |
NA |
3-14 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
85 |
107 |
| 146 |
168 |
| 175 |
197 |
| 204 |
226 |
| 244 |
266 |
| 283 |
305 |
| 324 |
346 |
| 387 |
409 |
- Wolf-PSORT
Lj0g3v0344279.2 plas 10, cyto 2, chlo 1, vacu 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0344279.2 |
|