Miyakogusa Predicted Gene
- Lj0g3v0342139.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MU43_SOYBN |
689 |
74.8 |
82.0 |
(tr|I1MU43) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G33290.1 |
478 |
61.2 |
75.1 |
| Symbols: XGD1 | xylogalacturonan deficient 1 | chr5:12558439-12561840 FORWARD LENGTH=500 |
| Medicago |
Medtr4g115530.1 |
659 |
80.5 |
88.2 |
| glycosyltransferase | HC | chr4:47726861-47725488 | 20130731 |
| Soybean |
Glyma17g11850.1 |
689 |
74.8 |
82.0 |
|
| LJGI |
gnl|LJGI|GO025815 |
656 |
99.7 |
99.7 |
similar to UniRef100_A4Q7M7 Cluster: Exostosin-like; n=1; Medicago truncatula|Rep: Exostosin-like - Medicago truncatula (Barrel medic), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0342139.1 |
length: 445 aa. |
| IPR004263 |
Exostosin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF03016 |
Exostosin |
2.6e-61 |
107-394 |
| no_ID |
|
| HMMPanther |
PTHR11062 |
EXOSTOSIN |
2.2e-120 |
91-439 |
| HMMPanther |
PTHR11062:SF11 |
EXOSTOSIN |
2.2e-120 |
91-439 |
| Seg |
seg |
seg |
NA |
297-308 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
4 |
25 |
- Wolf-PSORT
Lj0g3v0342139.1 vacu 5, golg 2, chlo 1, nucl 1, cyto 1, mito 1, plas 1, extr 1, E.R. 1, cyto_nucl 1, chlo_mito 1, nucl_plas 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0342139.1 |
|