Miyakogusa Predicted Gene
- Lj0g3v0341959.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LIC7_MEDTR |
521 |
61.6 |
75.1 |
(tr|G7LIC7) HAT family dimerization domain containing protein OS=Medicago truncatula GN=MTR_8g041360 PE=4 SV=1 |
| TAIR_pep |
AT3G17450.1 |
310 |
39.3 |
60.4 |
| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877 |
| Medicago |
Medtr3g028350.1 |
100 |
48.1 |
60.4 |
| hypothetical protein | LC | chr3:8989418-8988833 | 20130731 |
| Soybean |
Glyma15g21390.1 |
296 |
38.8 |
63.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0341959.1 |
length: 404 aa. |
| IPR007021 |
Domain of unknown function DUF659 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04937 |
DUF659 |
2.6e-50 |
3-136 |
| IPR008906 |
HAT dimerisation |
| Molecular Function |
GO:0046983 |
protein dimerization activity |
|
|
| HMMPfam |
PF05699 |
Dimer_Tnp_hAT |
1.6e-06 |
359-400 |
| IPR012337 |
Ribonuclease H-like domain |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| superfamily |
SSF53098 |
Ribonuclease |
1.1e-51 |
4-400 |
| no_ID |
|
| HMMPanther |
PTHR32166 |
FAMILY |
6.2e-144 |
1-401 |
| HMMPanther |
PTHR32166:SF0 |
SUBFAMILY |
6.2e-144 |
1-401 |
- Wolf-PSORT
Lj0g3v0341959.1 cyto 11, mito 1, cysk 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0341959.1 |
|